News Scan for Sep 10, 2021

News brief

CDC confirms 2 new variant flu cases in Iowa

The Centers for Disease Control and Prevention (CDC) today confirmed two new variant flu cases in Iowa, according to its weekly Fluview update.

One case involves the influenza A H3N2 variant (H3N2v) and the other the influenza A H1N2 variant (H1N2v). Both infections are in children. Neither was hospitalized, and both have fully recovered, the CDC said.

Household members of one of the patients kept or cared for swine, while the other child had  direct contact with swine. No human-to-human transmission has been associated with either case.

The CDC said, "When an influenza virus that normally circulates in swine (but not people) is detected in a person, it is called a 'variant influenza virus.' "

So far this year the CDC has recorded 9 variant flu cases, 2 of which were H3N2v, 2 H1N2v, and 5 H1N1v. Five cases have involved children, and four involved adults, all with direct or indirect contact with swine. No instances of human-to-human spread have occurred.
Sep 10 FluView report

 

Plague outbreak reported in Madagascar

Thirty cases of pneumonic plague have been reported in Madagascar, according to the latest communicable disease threats report from the European Centre for Disease Prevention and Control (ECDC).

The cases, 12 of which have been confirmed, were reported on Aug 29 by health authorities in the Arivonimamo district in the Itasy region of Madagascar. Seven cases have been fatal, all of them in the municipality of Miandrandra.

According to media reports, the first case was in a patient who died in the week starting Aug 23, and a second person in the same family died a week later. Active case finding and preventive drugs for high-risk contacts are ongoing.

Plague, which is caused by the bacterium Yersinia pestis and is mainly transmitted to humans through bites of infected fleas, is endemic in Madagascar. The country's last major plague outbreak, in 2017, resulted in 2,417 confirmed, probable, and suspected cases and 209 deaths. Seventy-seven percent of those cases were classified as pneumonic plague.
Sep 10 ECDC communicable disease threats report

 

Nigeria reports more vaccine-derived polio cases

Nigeria was the only country to report more polio cases this week, according to the latest weekly update from the Global Polio Eradication Initiative (GEPI).

The 18 cases of circulating vaccine-derived poliovirus type 2 (cVDPV2), reported in seven states, bring Nigeria's total for 2021 to 141 cases. Nine of the cases were reported in Borno, 3 in Kano, 2 in Jigawa, and 1 each in Gombe, Katsina, Tarabe, and Yobe.

Earlier in the week, at a meeting in Rome, G20 health ministers reaffirmed their commitment to eradicating polio.
Sep 10 GEPI weekly update
Sep 5-6 G2o health ministers declaration

 

H5N8 avian flu outbreaks reported in Europe, Pakistan

France has reported highly pathogenic H5N8 avian flu in poultry in the northeast of the country, following similar outbreaks in Belgium and Luxembourg.

Ducks, hens, turkeys and pigeons at a household in the Ardennes region of France were all slaughtered after detection of H5N8, Reuters reported.

Earlier this week, Luxembourg had reported its first detection of high-path H5N8 in wild birds at a backyard facility after the introduction of new animals, according to a World Organization for Animal Health (OIE) report. In that outbreak, which began on Sep 2, 14 of 60 birds died, and the rest were culled to prevent further disease spread.

According to Reuters, the French farm ministry said, "The health situation regarding highly pathogenic avian influenza is worrying. Since Aug. 1, 25 cases have been detected in Europe among wild and captive birds."

Last winter France had to cull 3 million birds in its duck-breeding region after wild birds spread H5N8 to poultry flocks, among other factors.

In Pakistan, an outbreak of H5N8 was reported in poultry at a farm in Punjab province. The virus killed all 3,000 birds at the facility, according to the OIE. That outbreak began on Aug 4.
Sep 10 Reuters
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Sep 7 OIE Luxembourg
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Sep 8 OIE Pakistan
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COVID-19 Scan for Sep 10, 2021

News brief

Two thirds of COVID survivors report persistent symptoms 4 weeks later

A new Centers for Disease Control and Prevention (CDC) study shows that 65.9% of a sample of US adults who tested positive for COVID-19 reported at least one lingering symptom more than a month later.

The study, published today in Morbidity and Mortality Weekly Report (MMWR), involved online nonprobability sampling of 3,135 community-dwelling adults who had been tested for COVID-19 since Jan 2020. Of the participants, 698 reported a diagnosis of COVID-19, while 2,437 said they tested negative. The sampling took place from Apr 9 to 23, 2021.

Among respondents who tested positive, 86.5% reported initial symptoms, compared with 61.7% of those who tested negative.

Relative to participants who tested negative for COVID-19, those who tested positive reported a significantly higher prevalence of any persistent symptom (65.9% vs 42.9%), fatigue (22.5% vs 12.0%), loss of smell or taste (17.3% vs 1.7%), shortness of breath (15.5% vs 5.2%), cough (14.5% vs 4.9%), and headache (13.8% vs 9.9%).

A larger proportion of coronavirus-positive respondents indicated that they believed that their long-term symptoms improved after they received a COVID-19 vaccine (28.7%) than negative respondents did (15.7%).

The weighted prevalence of a positive COVID-19 test result was 22.2%. Compared with participants who tested negative for COVID-19, infected respondents were younger (39.3 vs 45.3 years), were more likely to be employed (70.5% vs 61.6%), had higher household incomes (50.8% vs 43.9% made at least $60,000), and were more likely to live in an urban area (43.8% vs 37.6%).

The researchers said the findings can inform public health preparedness efforts, guide resource allocation for the care of patients with long COVID-19, and support communication efforts about experiences with vaccination.

"The findings can also aid efforts to address post-COVID conditions, including helping health care professionals recognize the most common symptoms and optimize care for patients whose symptoms persist," the authors concluded.
Sep 10 MMWR study

 

Adolescent eating disorders increased in pandemic, study says

Hospital admissions related to eating disorders (EDs) increased 123% among 10- to 23-year-olds during the pandemic at Michigan's C.S. Mott Children's Hospital, according to a study today in Pediatrics.

The researchers compared the number of ED-related admissions during the first 12 months of the pandemic (Apr 1, 2020, to Mar 31, 2021) with the same months from 2017 onward. Despite lower admissions in April 2020—which the researchers say could be due to the start of the state's lockdown—the pandemic period still had 125 admissions, compared with an average of 56 in the past 3 years.

Patient demographics remained similar before and after the pandemic began. Most were girls (88.4% pre-pandemic vs 90.2%), White (84.9% pre-pandemic before vs 90.2%), and about 15 years old (average, 15.1 pre-pandemic vs 15.2). The only significant change during the pandemic was a decrease in the proportion of publicly insured patients (8.8% vs 19.9%).

"Psychologically, adolescents with low self-esteem or depressive symptoms are more likely to develop EDs, and many describe worsening of these factors during the pandemic," the researchers write, adding that disruptions to day-to-day lives and relationships may have also exacerbated behaviors. While they note that some patients may have been more likely to be admitted because they were spending more time with their parents, they also say that COVID-related disruptions may have decreased access to ED care.

They conclude, "Our findings suggest those who care for adolescents with EDs in the inpatient setting and beyond should be prepared to address challenges posed by increasing numbers of severely ill ED patients."

Only restrictive EDs (eg, anorexia nervosa) were included in the study. Patients admitted solely for psychiatric reasons, those who had weight loss without ED diagnosis, or those with nonrestrictive EDs or bulimia nervosa were excluded.
Sep 10 Pediatrics study

ASP Scan (Weekly) for Sep 10, 2021

News brief

Our weekly wrap-up of antimicrobial stewardship & antimicrobial resistance scans

VA study finds faster receipt of antibiotics in sepsis patients

Originally published by CIDRAP News Sep 9

A study of US veterans hospitalized with community-acquired sepsis shows an overall decline in time-to-antibiotics, with significant variation across hospitals, researchers reported this week in JAMA Network Open.

The observational cohort study examined the time from presentation to antibiotic administration in sepsis patients admitted to 130 Veterans Affairs (VA) hospitals from 2013 to 2018. Faster receipt of antibiotics has been associated with improved survival in sepsis patients, and sepsis quality improvement programs have resulted in faster administration of antibiotics, but it's unclear if antibiotic timing for sepsis has improved outside of formal performance incentive programs.

Among a total of 111,385 sepsis hospitalizations identified during the study period, 7,574 patients (6.8%) died in the hospital and 13,855 (12.4%) died within 30 days. Median time-to-antibiotics was 3.9 (2.4 to 6.5) hours, declining from 4.5 hours during 2013-2014 to 3.5 hours during 2017-2018—an absolute change of 54.6 minutes and a relative change of 22.2%. After adjusting for patient characteristics, median time-to-antibiotics declined by 9 minutes per year.

Analysis of hospital-level variation in time-to-antibiotics showed that the magnitude of decrease varied across hospitals, with hospitals that had faster baseline time-to-antibiotics experiencing less change over time. Hospitals in the slowest tertile decreased time to antibiotics by 16.6 minutes per year, while hospitals in the fastest tertile saw time-to-antibiotics decline by 7.2 minutes per year. Median time-to-antibiotics varied by 118.2% across hospitals during 2017-2018, ranging from 3.1 to 6.7 hours.

"This variation persisted after adjustment for granular patient characteristics, suggesting that sepsis practice patterns truly differ across hospitals," the study authors wrote. "This may represent a potential opportunity for practice improvement going forward, but the benefits of further accelerating time-to-antibiotics must be balanced against the risk of driving antibiotic overuse in patients with noninfectious illness."
Sep 7 JAMA Netw Open study

 

Trial data support shorter antibiotic course for bloodstream infections

Originally published by CIDRAP News Sep 9

The results of a randomized controlled trial conducted in Spain suggest that a 7-day course of antibiotics for Enterobacterales bloodstream infections (eBSIs) is preferable to 14 days, researchers reported yesterday in Clinical Microbiology and Infection.

The open-label, multi-center study enrolled patients diagnosed with eBSI from five Spanish hospitals to receive either 7 days (the experimental arm) or 14 days of antibiotic treatment (the control arm). Patients were followed for 28 days after stopping antibiotic treatment. The primary end point was days of treatment at the end of follow-up, and clinical outcomes were assessed through relapse of eBSI, relapse of fever, and clinical cure (resolution of all signs and symptoms of infection).

Secondary end points included crude mortality, superinfections, and adverse events. A superiority margin of 3 days was set for the primary end point, and a non-inferiority margin of 10% for clinical outcomes.

Of the 248 patients enrolled, 119 were assigned to 7 days of antibiotics and 129 to 14 days. The median length of antibiotic treatment in the intention-to-treat population was 7 days in the experimental arm and 14 in the control arm. No significant differences were observed for the other end points at the end of the 28-day follow-up, including mortality, relapse of eBSI, relapse of fever, superinfections, or drug-related adverse events. The non-inferiority margin was met for all clinical outcomes except relapse of fever, which was more frequent in the 7-day group (difference in absolute risk, —0.2%).

A Desirability of Outcome Ranking and Response Adjusted for Duration of Antibiotic Risk (DOOR/RADAR) analysis showed that patients receiving 7 days of treatment had a 77.7% greater probability of achieving better results compared with those who received 14 days of treatment.

The study authors say the findings on relapse of fever suggest some patients may need more than 7 days of antibiotics, but that the overall benefit of shorter antibiotic treatments is clear.

"In conclusion, this trial points to 7-day course of antibiotics as the preferential treatment for eBSI, as long as the source is properly controlled," they wrote. "The potential impact of implementing this recommendation into clinical practice would be significant in the fight against bacterial resistance."
Sep 8 Clin Microbiol Infect study

 

Study describes impact of XDR typhoid on young children

Originally published by CIDRAP News Sep 7

A new study by researchers in Pakistan details the impact and response to treatment among children diagnosed as having extensively drug-resistant (XDR) typhoid infections.

The study, published late last week in BMC Infectious Diseases, reviewed the records of 680 children who had culture-proven XDR Salmonella enterica serovar Typhi infections and were treated at a hospital in Karachi at any point from July 2017 to December 2018.

The World Health Organization estimates that there were 5,247 cases of XDR Salmonella Typhi—which is resistant to five classes of antibiotics—in Karachi from November 2016 to December 2019, but data on clinical features and response to treatment among children has been scarce. The estimated incidence of enteric fever in Pakistan is 413 cases per 100,000 population among children ages 2 to 4, and 573 cases/100,000 population in children ages 5 to 15.

The median age of the patients was 5, and 57.5% were boys. Of the 270 patients with recorded outcomes, 234 (86.7%) were cured within 14 days, while a delayed response to antibiotics was noted in 32 (11.9%). Four children died. Seventy-six children (29%) recovered after treatment with a combination of meropenem and azithromycin, 72% were successfully treated with azithromycin alone, and 15 (6%) responded to meropenem alone.

The study authors note that literature from other parts of Pakistan has also reported a higher frequency of infection among children aged 5 years or younger, which could be explained by the fact that children have lower immunity and require lower bacterial doses to develop infection.

"This study confirms that XDR S. Typhi is common in children under 5 years of age," they wrote. "We advocate increasing nationwide awareness about the consumption of safe water, antibiotic stewardship and immunisation practices of children."
Sep 3 BMC Infect Dis study

 

Indian surveillance report highlights rising carbapenem resistance

Originally published by CIDRAP News Sep 7

The latest antimicrobial resistance (AMR) surveillance data from India shows an increase in carbapenem-resistant Enterobacterales and a rise in fungal infections among hospitalized patients.

The 2020 report from the Indian Council of Medical Research (ICMR) Antimicrobial Resistance Research and Surveillance Network shows that Escherichia coli was the most commonly isolated bacterial pathogen among 65,561 isolates collected from tertiary care hospitals, followed by Klebsiella pneumoniaePseudomonas aeruginosaAcinetobacter baumannii, and Staphylococcus aureus

Among the E coli isolates, susceptibility to imipenem was 72%, down from 86% in 2016 but up from 63% in 2019. K pneumoniae susceptibility fell from 65% in 2016 to 45% in 2020. The authors of the report say the lower susceptibility to imipenem is reflective of the increase in carbapenem use in India over the past two decades.

The ICMR also reported reduced susceptibility in A baumannii and P aeruginosa. Among A baumannii isolates, reduced susceptibility of 10% to 20% was observed against carbapenems, cephalosporins, monobactams, and beta-lactam/beta-lactamase inhibitor combinations. Only 40% of P aeruginosa isolates were susceptible to fluoroquinolones, and 60% to 70% were susceptible to carbapenems, cephalosporins, and aminoglycosides.

Among the increasing number of fungal infections observed in Indian hospitals, the ICMR reported that the multidrug-resistant yeast Candida auris was consistently isolated from regional hospitals across India. Most C auris isolates were resistant to fluconazole, and the incidence of echinocandin resistance is on the rise.

"Systematic collection, evaluation, and analysis of resistance data of specific pathogens for [the] last five years have highlighted that certain pathogens have become highly drug resistant and have become clinicians' dilemma," the report noted. "Aggressive action for prevention, containment, and treatment are needed at the national level."
Sep 2 ICMR surveillance report

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